Utilisateur·rice

Laurent • Tichit
Maître de Conférences (MCF H) • Affiliation : Aix-Marseille Université (AMU)
Site : Luminy • Bureau : 123 • Etage du bureau : 1 •

ALEA-BMA-MABioS (équipe BioMath Alea - Mathématiques & Algorithmique pour la Biologie des Systèmes)

Groupe(s) scientifiques(s) de l'utilisateur :

Rechercher mots clef :
    Graph partitioning Database MIAME Quantitative polymerase chain reaction CGC Interface for C elegans experiments QPCR

Thématiques scientifiques :
  • Theoretical computer science, computability
  • Modelization, equations related to biology

Publications HAL

2020/11 - MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach

2020/11 - A Multi-Objective Genetic Algorithm to Find Active Modules in Multiplex Biological Networks

2019/12 - Population-based meta-heuristic for active modules identification

2019/09 Nature Methods - Assessment of network module identification across complex diseases

2019/05 Antimicrobial Agents and Chemotherapy - An Integrative Database of β-Lactamase Enzymes: Sequences, Structures, Functions, and Phylogenetic Trees

2018/07 Bioinformatics - Random walk with restart on multiplex and heterogeneous biological networks

2017/01 Journal of Discrete Algorithms - Designing optimal-and fast-on-average pattern matching algorithms

2016/04 BMC Biology - A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes

2015/01 G3 - Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans

2014/11 G3 - Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans

2014/01 Worm - ICeE an interface for C. elegans experiments

2013/01 BioSystems - Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters

2012/07 - Logical modelling of cellular decision processes with GINsim

2011/10 - ModClust: a Cytoscape plugin for modularity-based clustering of networks

2011/01 PLoS ONE - A Comprehensive Analysis of Gene Expression Changes Provoked by Bacterial and Fungal Infection in C. elegans

2009/12 Bioinformatics - SimCT: a generic tool to visualize ontology-based relationships for biological objects.

2007/01 Journal of Discrete Algorithms - Local Similarity Between Quotiented Ordered Trees

2004/06 - Local Similarity Between Trees

2003/01 Theoretical Computer Science - R{NA} secondary structure comparison: exact analysis of the {Z}hang-{S}hasha tree edit algorithm


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